Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR30981.1 | SFR30982.1 | SAMN04487937_0818 | SAMN04487937_0819 | CopG family transcriptional regulator, nickel-responsive regulator; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family. | DNA-binding transcriptional regulator, PadR family. | 0.697 |
SFR30981.1 | SFR30983.1 | SAMN04487937_0818 | SAMN04487937_0820 | CopG family transcriptional regulator, nickel-responsive regulator; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family. | Phosphoglycolate phosphatase. | 0.601 |
SFR30981.1 | SFR30984.1 | SAMN04487937_0818 | SAMN04487937_0821 | CopG family transcriptional regulator, nickel-responsive regulator; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family. | Hypothetical protein. | 0.421 |
SFR30982.1 | SFR30981.1 | SAMN04487937_0819 | SAMN04487937_0818 | DNA-binding transcriptional regulator, PadR family. | CopG family transcriptional regulator, nickel-responsive regulator; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family. | 0.697 |
SFR30982.1 | SFR30983.1 | SAMN04487937_0819 | SAMN04487937_0820 | DNA-binding transcriptional regulator, PadR family. | Phosphoglycolate phosphatase. | 0.664 |
SFR30982.1 | SFR30984.1 | SAMN04487937_0819 | SAMN04487937_0821 | DNA-binding transcriptional regulator, PadR family. | Hypothetical protein. | 0.460 |
SFR30982.1 | SFR31004.1 | SAMN04487937_0819 | SAMN04487937_0841 | DNA-binding transcriptional regulator, PadR family. | 3-hydroxy-3-methylglutaryl-coenzyme A reductase; Belongs to the HMG-CoA reductase family. | 0.648 |
SFR30983.1 | SFR30981.1 | SAMN04487937_0820 | SAMN04487937_0818 | Phosphoglycolate phosphatase. | CopG family transcriptional regulator, nickel-responsive regulator; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family. | 0.601 |
SFR30983.1 | SFR30982.1 | SAMN04487937_0820 | SAMN04487937_0819 | Phosphoglycolate phosphatase. | DNA-binding transcriptional regulator, PadR family. | 0.664 |
SFR30983.1 | SFR30984.1 | SAMN04487937_0820 | SAMN04487937_0821 | Phosphoglycolate phosphatase. | Hypothetical protein. | 0.581 |
SFR30984.1 | SFR30981.1 | SAMN04487937_0821 | SAMN04487937_0818 | Hypothetical protein. | CopG family transcriptional regulator, nickel-responsive regulator; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family. | 0.421 |
SFR30984.1 | SFR30982.1 | SAMN04487937_0821 | SAMN04487937_0819 | Hypothetical protein. | DNA-binding transcriptional regulator, PadR family. | 0.460 |
SFR30984.1 | SFR30983.1 | SAMN04487937_0821 | SAMN04487937_0820 | Hypothetical protein. | Phosphoglycolate phosphatase. | 0.581 |
SFR31004.1 | SFR30982.1 | SAMN04487937_0841 | SAMN04487937_0819 | 3-hydroxy-3-methylglutaryl-coenzyme A reductase; Belongs to the HMG-CoA reductase family. | DNA-binding transcriptional regulator, PadR family. | 0.648 |