STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR35533.1PAS domain S-box-containing protein. (509 aa)    
Predicted Functional Partners:
SFR47286.1
Two-component system, OmpR family, response regulator MprA.
  
 0.824
SFR48401.1
PAS domain S-box-containing protein.
 
 
  0.715
SFR55638.1
Methyl-accepting chemotaxis protein.
  
  
  0.709
SFR50552.1
DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains.
  
 
  0.661
SFR39145.1
PAS domain S-box-containing protein.
  
 
  0.645
SFR44886.1
Response regulator receiver domain-containing protein.
  
 
  0.640
SFR48495.1
PAS domain S-box-containing protein.
 
 
 
0.625
SFR30858.1
HalX domain-containing protein; Manually curated.
  
 
  0.624
SFR31013.1
HalX domain-containing protein.
  
 
  0.617
SFR30738.1
PAS fold.
 
 
 
0.600
Your Current Organism:
Halorubrum sodomense
NCBI taxonomy Id: 35743
Other names: ATCC 33755, CIP 105330, DSM 3755, H. sodomense, Halobacterium sodomense, Halobacterium sodomitanum, Halobacterium sodomiticum, Halorubrobacterium sodomense, IFO 14740, JCM 8880, NBRC 14740, NCIMB 2197, strain RD-26
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.