STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR37047.1Pyridine nucleotide-disulphide oxidoreductase. (339 aa)    
Predicted Functional Partners:
SFR37065.1
Iron complex transport system ATP-binding protein.
  
    0.788
SFR37055.1
Iron complex transport system permease protein.
  
    0.781
SFR37037.1
ABC-type Fe3+-hydroxamate transport system, substrate-binding protein.
       0.773
SFR40221.1
Thioredoxin reductase (NADPH).
  
  
  0.654
SFR37076.1
ABC-type Fe3+-hydroxamate transport system, substrate-binding protein.
       0.543
SFR37085.1
Hypothetical protein.
       0.543
SFR30568.1
Glutamine synthetase.
    
 0.525
SFR39020.1
NADH dehydrogenase subunit C /NADH dehydrogenase subunit D.
   
  
 0.524
SFR60580.1
Cystathionine beta-lyase/cystathionine gamma-synthase.
   
 
 0.517
SFR50861.1
NhaP-type Na+/H+ or K+/H+ antiporter.
  
  
 0.513
Your Current Organism:
Halorubrum sodomense
NCBI taxonomy Id: 35743
Other names: ATCC 33755, CIP 105330, DSM 3755, H. sodomense, Halobacterium sodomense, Halobacterium sodomitanum, Halobacterium sodomiticum, Halorubrobacterium sodomense, IFO 14740, JCM 8880, NBRC 14740, NCIMB 2197, strain RD-26
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.