STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR37235.1Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase. (156 aa)    
Predicted Functional Partners:
SFR45079.1
Cytochrome c oxidase subunit I+III; Belongs to the heme-copper respiratory oxidase family.
     
 0.735
SFR55411.1
Glutamate synthase domain-containing protein 2.
  
 
 0.689
SFR30284.1
MFS transporter, NNP family, nitrate/nitrite transporter.
  
 
 0.590
SFR30868.1
uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
  
  
 0.553
SFR47442.1
Phosphoadenosine phosphosulfate reductase.
  
  
 0.540
SFR33178.1
Sulfide:quinone oxidoreductase.
  
 0.525
SFR46158.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
 0.525
SFR46391.1
Pyridine nucleotide-disulphide oxidoreductase.
  
 0.525
SFR30568.1
Glutamine synthetase.
     
 0.501
SFR37244.1
Hypothetical protein.
       0.489
Your Current Organism:
Halorubrum sodomense
NCBI taxonomy Id: 35743
Other names: ATCC 33755, CIP 105330, DSM 3755, H. sodomense, Halobacterium sodomense, Halobacterium sodomitanum, Halobacterium sodomiticum, Halorubrobacterium sodomense, IFO 14740, JCM 8880, NBRC 14740, NCIMB 2197, strain RD-26
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