Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFR38049.1 | SFR44356.1 | SAMN04487937_1695 | SAMN04487937_1956 | Asparagine synthase (glutamine-hydrolysing). | metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. | 0.710 |
| SFR44344.1 | SFR44356.1 | SAMN04487937_1955 | SAMN04487937_1956 | Hypothetical protein. | metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. | 0.545 |
| SFR44356.1 | SFR38049.1 | SAMN04487937_1956 | SAMN04487937_1695 | metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. | Asparagine synthase (glutamine-hydrolysing). | 0.710 |
| SFR44356.1 | SFR44344.1 | SAMN04487937_1956 | SAMN04487937_1955 | metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. | Hypothetical protein. | 0.545 |
| SFR44356.1 | SFR44494.1 | SAMN04487937_1956 | SAMN04487937_1968 | metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. | 2-(3-amino-3-carboxypropyl)histidine synthase; Catalyzes the first step of diphthamide biosynthesis, i.e. the transfer of the 3-amino-3-carboxypropyl group from S-adenosyl-L- methionine (SAM) to the C2 position of the imidazole ring of the target histidine residue in translation elongation factor 2 (EF-2). Belongs to the DPH1/DPH2 family. | 0.548 |
| SFR44356.1 | dphB | SAMN04487937_1956 | SAMN04487937_1833 | metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. | Diphthine synthase; S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis. | 0.645 |
| SFR44356.1 | eif2g | SAMN04487937_1956 | SAMN04487937_0433 | metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. | Translation initiation factor 2 subunit 3; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EIF2G subfamily. | 0.444 |
| SFR44356.1 | fen | SAMN04487937_1956 | SAMN04487937_0934 | metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. A [...] | 0.455 |
| SFR44356.1 | fusA | SAMN04487937_1956 | SAMN04487937_1148 | metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. | Elongation factor 2; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | 0.960 |
| SFR44356.1 | guaAB | SAMN04487937_1956 | SAMN04487937_0257 | metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.452 |
| SFR44356.1 | rpl19e | SAMN04487937_1956 | SAMN04487937_0384 | metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. | Large subunit ribosomal protein L19e; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL19 family. | 0.509 |
| SFR44356.1 | rpl4 | SAMN04487937_1956 | SAMN04487937_0367 | metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. | Large subunit ribosomal protein L4e; Forms part of the polypeptide exit tunnel. | 0.476 |
| SFR44494.1 | SFR44356.1 | SAMN04487937_1968 | SAMN04487937_1956 | 2-(3-amino-3-carboxypropyl)histidine synthase; Catalyzes the first step of diphthamide biosynthesis, i.e. the transfer of the 3-amino-3-carboxypropyl group from S-adenosyl-L- methionine (SAM) to the C2 position of the imidazole ring of the target histidine residue in translation elongation factor 2 (EF-2). Belongs to the DPH1/DPH2 family. | metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. | 0.548 |
| SFR44494.1 | dphB | SAMN04487937_1968 | SAMN04487937_1833 | 2-(3-amino-3-carboxypropyl)histidine synthase; Catalyzes the first step of diphthamide biosynthesis, i.e. the transfer of the 3-amino-3-carboxypropyl group from S-adenosyl-L- methionine (SAM) to the C2 position of the imidazole ring of the target histidine residue in translation elongation factor 2 (EF-2). Belongs to the DPH1/DPH2 family. | Diphthine synthase; S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis. | 0.802 |
| SFR44494.1 | fen | SAMN04487937_1968 | SAMN04487937_0934 | 2-(3-amino-3-carboxypropyl)histidine synthase; Catalyzes the first step of diphthamide biosynthesis, i.e. the transfer of the 3-amino-3-carboxypropyl group from S-adenosyl-L- methionine (SAM) to the C2 position of the imidazole ring of the target histidine residue in translation elongation factor 2 (EF-2). Belongs to the DPH1/DPH2 family. | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. A [...] | 0.463 |
| SFR44494.1 | fusA | SAMN04487937_1968 | SAMN04487937_1148 | 2-(3-amino-3-carboxypropyl)histidine synthase; Catalyzes the first step of diphthamide biosynthesis, i.e. the transfer of the 3-amino-3-carboxypropyl group from S-adenosyl-L- methionine (SAM) to the C2 position of the imidazole ring of the target histidine residue in translation elongation factor 2 (EF-2). Belongs to the DPH1/DPH2 family. | Elongation factor 2; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily. | 0.996 |
| SFR44494.1 | rpl19e | SAMN04487937_1968 | SAMN04487937_0384 | 2-(3-amino-3-carboxypropyl)histidine synthase; Catalyzes the first step of diphthamide biosynthesis, i.e. the transfer of the 3-amino-3-carboxypropyl group from S-adenosyl-L- methionine (SAM) to the C2 position of the imidazole ring of the target histidine residue in translation elongation factor 2 (EF-2). Belongs to the DPH1/DPH2 family. | Large subunit ribosomal protein L19e; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL19 family. | 0.574 |
| SFR44494.1 | rpl4 | SAMN04487937_1968 | SAMN04487937_0367 | 2-(3-amino-3-carboxypropyl)histidine synthase; Catalyzes the first step of diphthamide biosynthesis, i.e. the transfer of the 3-amino-3-carboxypropyl group from S-adenosyl-L- methionine (SAM) to the C2 position of the imidazole ring of the target histidine residue in translation elongation factor 2 (EF-2). Belongs to the DPH1/DPH2 family. | Large subunit ribosomal protein L4e; Forms part of the polypeptide exit tunnel. | 0.547 |
| dphB | SFR44356.1 | SAMN04487937_1833 | SAMN04487937_1956 | Diphthine synthase; S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis. | metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. | 0.645 |
| dphB | SFR44494.1 | SAMN04487937_1833 | SAMN04487937_1968 | Diphthine synthase; S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis. | 2-(3-amino-3-carboxypropyl)histidine synthase; Catalyzes the first step of diphthamide biosynthesis, i.e. the transfer of the 3-amino-3-carboxypropyl group from S-adenosyl-L- methionine (SAM) to the C2 position of the imidazole ring of the target histidine residue in translation elongation factor 2 (EF-2). Belongs to the DPH1/DPH2 family. | 0.802 |
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