STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR45264.1Acyl-CoA dehydrogenase. (382 aa)    
Predicted Functional Partners:
SFR35829.1
Electron transfer flavoprotein alpha subunit.
 0.987
SFR39020.1
NADH dehydrogenase subunit C /NADH dehydrogenase subunit D.
   
 0.964
SFR35837.1
Electron transfer flavoprotein beta subunit.
 
 
 0.870
SFR32942.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
   
 0.858
SFR30899.1
Enoyl-CoA hydratase/carnithine racemase.
  
 0.669
SFR47527.1
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.669
SFR30528.1
3-hydroxybutyryl-CoA dehydrogenase.
 
 0.633
SFR56790.1
enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.615
SFR45278.1
RIO1 family protein.
       0.585
SFR38238.1
acetyl-CoA C-acetyltransferase.
   
 0.564
Your Current Organism:
Halorubrum sodomense
NCBI taxonomy Id: 35743
Other names: ATCC 33755, CIP 105330, DSM 3755, H. sodomense, Halobacterium sodomense, Halobacterium sodomitanum, Halobacterium sodomiticum, Halorubrobacterium sodomense, IFO 14740, JCM 8880, NBRC 14740, NCIMB 2197, strain RD-26
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