STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR49092.1Glucose-1-phosphate thymidylyltransferase. (250 aa)    
Predicted Functional Partners:
SFR30690.1
Phosphomannomutase / phosphoglucomutase; Belongs to the phosphohexose mutase family.
 
 
 0.952
SFR34619.1
dTDP-glucose 4,6-dehydratase.
 
 0.753
SFR30276.1
Phosphomannomutase.
  
 
 0.689
SFR47370.1
Phosphoglucosamine mutase; Belongs to the phosphohexose mutase family.
 
 
 0.653
SFR34594.1
Glucose-1-phosphate thymidylyltransferase.
 
 
0.645
SFR48435.1
Translation initiation factor 2 subunit alpha (aeIF-2a).
   
 0.629
SFR47198.1
UDP-glucose 4-epimerase.
  
 0.588
SFR48221.1
Phosphomannomutase; Belongs to the phosphohexose mutase family.
 
 
 0.548
SFR49102.1
Glycosyltransferase, GT2 family.
 
     0.545
SFR34584.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Manually curated.
  
 
 0.539
Your Current Organism:
Halorubrum sodomense
NCBI taxonomy Id: 35743
Other names: ATCC 33755, CIP 105330, DSM 3755, H. sodomense, Halobacterium sodomense, Halobacterium sodomitanum, Halobacterium sodomiticum, Halorubrobacterium sodomense, IFO 14740, JCM 8880, NBRC 14740, NCIMB 2197, strain RD-26
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