STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR49302.1Predicted dehydrogenase. (403 aa)    
Predicted Functional Partners:
SFR49292.1
Hypothetical protein.
       0.768
SFR31103.1
AP endonuclease family 2 C terminus.
 
 
 0.736
SFR31088.1
Sugar phosphate isomerase/epimerase.
 
 
 0.696
SFR60057.1
Predicted dehydrogenase.
  
     0.688
SFR30534.1
Xylose dehydrogenase (NAD/NADP).
  
     0.658
SFR31102.1
Predicted dehydrogenase.
 
     0.656
SFR58785.1
Predicted dehydrogenase.
  
     0.649
SFR49251.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.647
SFR30407.1
Predicted dehydrogenase.
  
     0.597
SFR30722.1
Sugar phosphate isomerase/epimerase.
 
 
 0.526
Your Current Organism:
Halorubrum sodomense
NCBI taxonomy Id: 35743
Other names: ATCC 33755, CIP 105330, DSM 3755, H. sodomense, Halobacterium sodomense, Halobacterium sodomitanum, Halobacterium sodomiticum, Halorubrobacterium sodomense, IFO 14740, JCM 8880, NBRC 14740, NCIMB 2197, strain RD-26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.