Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFE33455.1 | SFF04959.1 | SAMN05421541_101217 | SAMN05421541_105425 | Glutamate--cysteine ligase. | Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | 0.856 |
SFE33455.1 | SFF24690.1 | SAMN05421541_101217 | SAMN05421541_107474 | Glutamate--cysteine ligase. | Glutamine synthetase. | 0.779 |
SFE33455.1 | SFF31814.1 | SAMN05421541_101217 | SAMN05421541_108424 | Glutamate--cysteine ligase. | RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.776 |
SFE33455.1 | SFF38465.1 | SAMN05421541_101217 | SAMN05421541_109420 | Glutamate--cysteine ligase. | Cystathione beta-lyase. | 0.742 |
SFE33455.1 | SFF47560.1 | SAMN05421541_101217 | SAMN05421541_11175 | Glutamate--cysteine ligase. | Glutamate dehydrogenase. | 0.839 |
SFE33455.1 | SFF58506.1 | SAMN05421541_101217 | SAMN05421541_11455 | Glutamate--cysteine ligase. | Cysteine synthase A. | 0.802 |
SFE33455.1 | egtA | SAMN05421541_101217 | SAMN05421541_12518 | Glutamate--cysteine ligase. | Glutamate--cysteine ligase; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). This compound is used as substrate for the biosynthesis of the low- molecular thiol compound ergothioneine. | 0.953 |
SFE33455.1 | egtB | SAMN05421541_101217 | SAMN05421541_12519 | Glutamate--cysteine ligase. | iron(II)-dependent oxidoreductase; Catalyzes the oxidative sulfurization of hercynine (N- alpha,N-alpha,N-alpha-trimethyl-L-histidine) into hercynyl-gamma-L- glutamyl-L-cysteine sulfoxide, a step in the biosynthesis pathway of ergothioneine; Belongs to the EgtB family. | 0.947 |
SFE33455.1 | egtC | SAMN05421541_101217 | SAMN05421541_12520 | Glutamate--cysteine ligase. | Glutamine amidotransferase; Catalyzes the hydrolysis of the gamma-glutamyl amide bond of hercynyl-gamma-L-glutamyl-L-cysteine sulfoxide to produce hercynylcysteine sulfoxide, a step in the biosynthesis pathway of ergothioneine. | 0.798 |
SFE33455.1 | egtD | SAMN05421541_101217 | SAMN05421541_12521 | Glutamate--cysteine ligase. | L-histidine Nalpha-methyltransferase; Catalyzes the SAM-dependent triple methylation of the alpha- amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine; Belongs to the methyltransferase superfamily. EgtD family. | 0.874 |
SFF04959.1 | SFE33455.1 | SAMN05421541_105425 | SAMN05421541_101217 | Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | Glutamate--cysteine ligase. | 0.856 |
SFF04959.1 | SFF31814.1 | SAMN05421541_105425 | SAMN05421541_108424 | Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.820 |
SFF04959.1 | SFF38465.1 | SAMN05421541_105425 | SAMN05421541_109420 | Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | Cystathione beta-lyase. | 0.746 |
SFF04959.1 | SFF58506.1 | SAMN05421541_105425 | SAMN05421541_11455 | Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | Cysteine synthase A. | 0.770 |
SFF04959.1 | egtA | SAMN05421541_105425 | SAMN05421541_12518 | Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | Glutamate--cysteine ligase; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). This compound is used as substrate for the biosynthesis of the low- molecular thiol compound ergothioneine. | 0.945 |
SFF24690.1 | SFE33455.1 | SAMN05421541_107474 | SAMN05421541_101217 | Glutamine synthetase. | Glutamate--cysteine ligase. | 0.779 |
SFF24690.1 | SFF31814.1 | SAMN05421541_107474 | SAMN05421541_108424 | Glutamine synthetase. | RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.860 |
SFF24690.1 | SFF47560.1 | SAMN05421541_107474 | SAMN05421541_11175 | Glutamine synthetase. | Glutamate dehydrogenase. | 0.959 |
SFF31814.1 | SFE33455.1 | SAMN05421541_108424 | SAMN05421541_101217 | RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Glutamate--cysteine ligase. | 0.776 |
SFF31814.1 | SFF04959.1 | SAMN05421541_108424 | SAMN05421541_105425 | RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | 0.820 |
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