STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE34936.1Carbon monoxide dehydrogenase subunit G. (365 aa)    
Predicted Functional Partners:
SFE34957.1
MoxR-like ATPase.
 
   
 0.970
SFE35022.1
Carbon-monoxide dehydrogenase large subunit.
 
 
 0.969
SFE34914.1
Hypothetical protein.
 
     0.961
SFE35072.1
Carbon-monoxide dehydrogenase medium subunit.
 
 
 0.961
SFE35049.1
Carbon-monoxide dehydrogenase small subunit.
 
  
  0.938
SFE35004.1
Xanthine dehydrogenase accessory factor.
 
     0.925
SFF72193.1
Carbon-monoxide dehydrogenase medium subunit.
 
 
 0.864
SFE34980.1
Molybdenum cofactor cytidylyltransferase.
 
     0.843
SFF72206.1
Carbon-monoxide dehydrogenase small subunit.
 
  
  0.826
SFF18759.1
CO or xanthine dehydrogenase, Mo-binding subunit.
  
 
 0.820
Your Current Organism:
Actinoplanes philippinensis
NCBI taxonomy Id: 35752
Other names: A. philippinensis, ATCC 12427, DSM 43019, IFO 13878, JCM 3001, NBRC 13878, NRRL 2506, VKM Ac-842
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