STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE37482.1Cholesterol oxidase. (525 aa)    
Predicted Functional Partners:
SFE58858.1
Ubiquinol-cytochrome c reductase cytochrome c subunit.
  
 
 0.878
SFE37447.1
Acetyl-CoA acetyltransferase.
 
   
 0.815
SFE37432.1
Hypothetical protein.
 
     0.814
SFE37468.1
acetyl-CoA C-acetyltransferase.
 
   
 0.811
SFF31175.1
Cholesterol oxidase.
  
  
 
0.804
SFF55554.1
Cholesterol oxidase.
  
  
 
0.803
SFF12341.1
Ankyrin repeat-containing protein.
   
 0.781
SFE36219.1
Hypothetical protein.
    
 0.777
SFF13501.1
Hypothetical protein.
    
 0.777
SFF10296.1
Hypothetical protein.
    
 0.777
Your Current Organism:
Actinoplanes philippinensis
NCBI taxonomy Id: 35752
Other names: A. philippinensis, ATCC 12427, DSM 43019, IFO 13878, JCM 3001, NBRC 13878, NRRL 2506, VKM Ac-842
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.