STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE51768.1Transcriptional regulator, RpiR family. (332 aa)    
Predicted Functional Partners:
SFE51683.1
N-acetylglucosamine transport system substrate-binding protein.
 
     0.754
SFF53830.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 
  0.752
SFE51731.1
N,N'-diacetylchitobiose transport system permease protein.
       0.653
SFE51748.1
N,N'-diacetylchitobiose transport system substrate-binding protein.
       0.650
SFE51711.1
N,N'-diacetylchitobiose transport system permease protein.
       0.642
SFE51666.1
N-acetylglucosamine transport system permease protein.
 
     0.626
SFE54281.1
Transketolase; Belongs to the transketolase family.
     
 0.596
SFF41704.1
Mannose-6-phosphate isomerase.
  
 
 0.573
SFE51642.1
N-acetylglucosamine transport system permease protein.
 
     0.548
SFF04462.1
2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase.
 
  
 0.533
Your Current Organism:
Actinoplanes philippinensis
NCBI taxonomy Id: 35752
Other names: A. philippinensis, ATCC 12427, DSM 43019, IFO 13878, JCM 3001, NBRC 13878, NRRL 2506, VKM Ac-842
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.