STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE49649.1Tight adherence protein B. (320 aa)    
Predicted Functional Partners:
SFE49672.1
Tight adherence protein C.
 
  
 0.994
SFE49610.1
Pilus assembly protein CpaE.
 
  
 0.993
SFE49625.1
Pilus assembly protein CpaF.
 
  
 0.983
SFE49587.1
Pilus assembly protein CpaB.
 
  
 0.955
SFE49562.1
TadE-like protein.
 
  
 0.949
SFF59143.1
Pilus assembly protein CpaF.
 
  
 0.915
SFE76592.1
Magnesium chelatase subunit D.
  
 0.834
SFE72545.1
Magnesium chelatase subunit I.
  
 0.821
SFF77090.1
Putative Flp pilus-assembly TadE/G-like.
 
  
 0.727
SFF54112.1
Hypothetical protein.
  
  
 0.664
Your Current Organism:
Actinoplanes philippinensis
NCBI taxonomy Id: 35752
Other names: A. philippinensis, ATCC 12427, DSM 43019, IFO 13878, JCM 3001, NBRC 13878, NRRL 2506, VKM Ac-842
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.