STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE58242.1Protein of unknown function; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA. (165 aa)    
Predicted Functional Partners:
SFF42998.1
Chorismate mutase.
  
     0.774
SFF56664.1
Phage shock protein A (PspA) family protein.
  
     0.773
SFF43225.1
Hypothetical protein.
  
     0.764
SFF56170.1
Protein of unknown function.
  
     0.764
SFE98730.1
PH domain-containing protein.
  
     0.762
SFE75951.1
Hypothetical protein.
  
     0.755
SFF62160.1
DNA-binding transcriptional regulator of glucitol operon.
  
     0.753
SFF16143.1
DivIVA domain-containing protein.
  
     0.751
SFF62524.1
Hypothetical protein.
  
     0.745
SFF62592.1
Protein of unknown function.
  
     0.739
Your Current Organism:
Actinoplanes philippinensis
NCBI taxonomy Id: 35752
Other names: A. philippinensis, ATCC 12427, DSM 43019, IFO 13878, JCM 3001, NBRC 13878, NRRL 2506, VKM Ac-842
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.