STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE70476.1Sugar phosphate isomerase/epimerase. (296 aa)    
Predicted Functional Partners:
SFE70458.1
Hypothetical protein.
     0.993
SFE70484.1
4-hydroxybenzoate polyprenyltransferase.
 
     0.979
SFE70510.1
Myo-inositol-1-phosphate synthase.
 
     0.979
SFE70403.1
Predicted pyrophosphatase or phosphodiesterase, AlkP superfamily.
 
     0.972
SFE70439.1
Hypothetical protein.
 
  
 0.972
SFE70416.1
Xylose isomerase-like TIM barrel.
 
     0.942
SFE70379.1
Geranylgeranyl diphosphate synthase, type I; Belongs to the FPP/GGPP synthase family.
       0.840
SFE70300.1
PKD domain-containing protein.
 
   
 0.815
SFE62845.1
Hypothetical protein.
 
     0.794
SFF09801.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
 
   
 0.755
Your Current Organism:
Actinoplanes philippinensis
NCBI taxonomy Id: 35752
Other names: A. philippinensis, ATCC 12427, DSM 43019, IFO 13878, JCM 3001, NBRC 13878, NRRL 2506, VKM Ac-842
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.