STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE91541.1Acetyltransferase (GNAT) family protein. (275 aa)    
Predicted Functional Partners:
SFE79375.1
Uncharacterized conserved protein, DUF1778 family.
   
   0.705
SFE91558.1
Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains.
       0.566
SFE91567.1
Hypothetical protein.
       0.566
SFF84136.1
FR47-like protein.
  
     0.534
SFF00476.1
Ricin-type beta-trefoil lectin domain-like.
  
     0.532
SFE56098.1
Hypothetical protein.
  
     0.519
SFE92927.1
Urea carboxylase.
   
  0.505
SFF79529.1
Hypothetical protein.
  
    0.504
SFF96017.1
Beta protein.
  
     0.501
SFF48164.1
Tetratricopeptide repeat-containing protein.
  
     0.499
Your Current Organism:
Actinoplanes philippinensis
NCBI taxonomy Id: 35752
Other names: A. philippinensis, ATCC 12427, DSM 43019, IFO 13878, JCM 3001, NBRC 13878, NRRL 2506, VKM Ac-842
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.