Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFE32238.1 | SFE41182.1 | SAMN05421541_101158 | SAMN05421541_101615 | Helix-hairpin-helix domain-containing protein. | Amino acid adenylation domain-containing protein. | 0.999 |
SFE32238.1 | SFE93340.1 | SAMN05421541_101158 | SAMN05421541_104539 | Helix-hairpin-helix domain-containing protein. | Thioester reductase domain-containing protein. | 0.999 |
SFE32238.1 | SFE93374.1 | SAMN05421541_101158 | SAMN05421541_104541 | Helix-hairpin-helix domain-containing protein. | Acyl transferase domain-containing protein. | 0.998 |
SFE32238.1 | SFE93467.1 | SAMN05421541_101158 | SAMN05421541_104547 | Helix-hairpin-helix domain-containing protein. | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | 0.999 |
SFE32238.1 | SFE93583.1 | SAMN05421541_101158 | SAMN05421541_104555 | Helix-hairpin-helix domain-containing protein. | Cytochrome P450. | 0.935 |
SFE32238.1 | SFE94274.1 | SAMN05421541_101158 | SAMN05421541_104599 | Helix-hairpin-helix domain-containing protein. | Hypothetical protein. | 0.985 |
SFE32238.1 | SFF74586.1 | SAMN05421541_101158 | SAMN05421541_12057 | Helix-hairpin-helix domain-containing protein. | Ferredoxin-NADP reductase. | 0.984 |
SFE32238.1 | SFF86303.1 | SAMN05421541_101158 | SAMN05421541_12657 | Helix-hairpin-helix domain-containing protein. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.984 |
SFE32238.1 | SFF89480.1 | SAMN05421541_101158 | SAMN05421541_12864 | Helix-hairpin-helix domain-containing protein. | Rifamycin polyketide synthase modules 1, 2 and 3. | 0.998 |
SFE32238.1 | rplF | SAMN05421541_101158 | SAMN05421541_110285 | Helix-hairpin-helix domain-containing protein. | Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.504 |
SFE41182.1 | SFE32238.1 | SAMN05421541_101615 | SAMN05421541_101158 | Amino acid adenylation domain-containing protein. | Helix-hairpin-helix domain-containing protein. | 0.999 |
SFE41182.1 | SFE93340.1 | SAMN05421541_101615 | SAMN05421541_104539 | Amino acid adenylation domain-containing protein. | Thioester reductase domain-containing protein. | 0.999 |
SFE41182.1 | SFE93374.1 | SAMN05421541_101615 | SAMN05421541_104541 | Amino acid adenylation domain-containing protein. | Acyl transferase domain-containing protein. | 0.999 |
SFE41182.1 | SFE93467.1 | SAMN05421541_101615 | SAMN05421541_104547 | Amino acid adenylation domain-containing protein. | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | 0.999 |
SFE41182.1 | SFE93583.1 | SAMN05421541_101615 | SAMN05421541_104555 | Amino acid adenylation domain-containing protein. | Cytochrome P450. | 0.997 |
SFE41182.1 | SFE94274.1 | SAMN05421541_101615 | SAMN05421541_104599 | Amino acid adenylation domain-containing protein. | Hypothetical protein. | 0.856 |
SFE41182.1 | SFF74586.1 | SAMN05421541_101615 | SAMN05421541_12057 | Amino acid adenylation domain-containing protein. | Ferredoxin-NADP reductase. | 0.846 |
SFE41182.1 | SFF86303.1 | SAMN05421541_101615 | SAMN05421541_12657 | Amino acid adenylation domain-containing protein. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.846 |
SFE41182.1 | SFF89480.1 | SAMN05421541_101615 | SAMN05421541_12864 | Amino acid adenylation domain-containing protein. | Rifamycin polyketide synthase modules 1, 2 and 3. | 0.999 |
SFE41182.1 | rplF | SAMN05421541_101615 | SAMN05421541_110285 | Amino acid adenylation domain-containing protein. | Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.953 |
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