STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE93583.1Cytochrome P450. (418 aa)    
Predicted Functional Partners:
SFE41182.1
Amino acid adenylation domain-containing protein.
 
 0.997
SFE32238.1
Helix-hairpin-helix domain-containing protein.
 
 0.935
SFE93374.1
Acyl transferase domain-containing protein.
 
 0.935
SFF89480.1
Rifamycin polyketide synthase modules 1, 2 and 3.
 
 0.933
SFE93467.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
 0.922
SFE93340.1
Thioester reductase domain-containing protein.
 0.898
SFF74586.1
Ferredoxin-NADP reductase.
 
 0.806
SFE94274.1
Hypothetical protein.
  
 0.804
SFF86303.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 0.803
rplF
Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.800
Your Current Organism:
Actinoplanes philippinensis
NCBI taxonomy Id: 35752
Other names: A. philippinensis, ATCC 12427, DSM 43019, IFO 13878, JCM 3001, NBRC 13878, NRRL 2506, VKM Ac-842
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