STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE94339.1ATP-binding cassette, subfamily C. (587 aa)    
Predicted Functional Partners:
SFE94391.1
Protein kinase domain-containing protein.
 
     0.876
SFE94348.1
ATP-binding cassette, subfamily B.
 
    
0.856
SFE32238.1
Helix-hairpin-helix domain-containing protein.
   
 0.802
SFE55072.1
ATP-binding cassette, subfamily C.
 
 
 
0.735
SFF03592.1
ABC-type bacteriocin/lantibiotic exporter, contains an N-terminal double-glycine peptidase domain.
 
 
 
0.734
SFE41182.1
Amino acid adenylation domain-containing protein.
  
 0.729
SFE55040.1
NHLM bacteriocin system ABC transporter, peptidase/ATP-binding protein.
   
 
0.720
SFF20278.1
ATP-binding cassette, subfamily C, CydCD.
  
 
 
0.627
SFF44920.1
Adenylyltransferase and sulfurtransferase.
  
   0.624
SFF66332.1
Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family.
    
 
 0.620
Your Current Organism:
Actinoplanes philippinensis
NCBI taxonomy Id: 35752
Other names: A. philippinensis, ATCC 12427, DSM 43019, IFO 13878, JCM 3001, NBRC 13878, NRRL 2506, VKM Ac-842
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