STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE94968.1Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family. (130 aa)    
Predicted Functional Partners:
SFF69848.1
PAS domain S-box-containing protein.
  
 0.982
SFF12920.1
Serine phosphatase RsbU, regulator of sigma subunit.
  
 0.978
SFF58324.1
Serine phosphatase RsbU, regulator of sigma subunit.
 
 0.934
SFF23572.1
Stage II sporulation protein E (SpoIIE).
  
 0.915
SFF30829.1
Response regulator receiver domain-containing protein.
  
 
 0.815
SFE31455.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
 
 0.787
SFF56947.1
Signal transduction histidine kinase.
  
 0.770
SFF21873.1
Serine phosphatase RsbU, regulator of sigma subunit.
  
 0.755
SFF56810.1
Hypothetical protein/two-component system, OmpR family, KDP operon response regulator KdpE.
  
 
 0.754
SFE32795.1
Signal transduction histidine kinase.
  
 
 0.752
Your Current Organism:
Actinoplanes philippinensis
NCBI taxonomy Id: 35752
Other names: A. philippinensis, ATCC 12427, DSM 43019, IFO 13878, JCM 3001, NBRC 13878, NRRL 2506, VKM Ac-842
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.