Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFE32795.1 | SFE85901.1 | SAMN05421541_101184 | SAMN05421541_10481 | Signal transduction histidine kinase. | Predicted ATPase. | 0.853 |
SFE32795.1 | SFF13662.1 | SAMN05421541_101184 | SAMN05421541_106312 | Signal transduction histidine kinase. | WD40 repeat. | 0.772 |
SFE32795.1 | SFF58333.1 | SAMN05421541_101184 | SAMN05421541_11435 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.999 |
SFE32795.1 | htpG | SAMN05421541_101184 | SAMN05421541_107229 | Signal transduction histidine kinase. | Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity. | 0.466 |
SFE32795.1 | rpoB | SAMN05421541_101184 | SAMN05421541_110309 | Signal transduction histidine kinase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.428 |
SFE85901.1 | SFE32795.1 | SAMN05421541_10481 | SAMN05421541_101184 | Predicted ATPase. | Signal transduction histidine kinase. | 0.853 |
SFE85901.1 | SFF13662.1 | SAMN05421541_10481 | SAMN05421541_106312 | Predicted ATPase. | WD40 repeat. | 0.781 |
SFE85901.1 | SFF58333.1 | SAMN05421541_10481 | SAMN05421541_11435 | Predicted ATPase. | Signal transduction histidine kinase. | 0.786 |
SFE85901.1 | SFF59963.1 | SAMN05421541_10481 | SAMN05421541_114232 | Predicted ATPase. | Nicotinamide-nucleotide adenylyltransferase, NadR type. | 0.829 |
SFE85901.1 | SFF67704.1 | SAMN05421541_10481 | SAMN05421541_117140 | Predicted ATPase. | Molecular chaperone HtpG. | 0.789 |
SFE85901.1 | alaS | SAMN05421541_10481 | SAMN05421541_10551 | Predicted ATPase. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.794 |
SFE85901.1 | alaS-2 | SAMN05421541_10481 | SAMN05421541_108123 | Predicted ATPase. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.794 |
SFE85901.1 | htpG | SAMN05421541_10481 | SAMN05421541_107229 | Predicted ATPase. | Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity. | 0.789 |
SFE85901.1 | rpoA | SAMN05421541_10481 | SAMN05421541_110271 | Predicted ATPase. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.796 |
SFE85901.1 | rpoB | SAMN05421541_10481 | SAMN05421541_110309 | Predicted ATPase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.800 |
SFF13662.1 | SFE32795.1 | SAMN05421541_106312 | SAMN05421541_101184 | WD40 repeat. | Signal transduction histidine kinase. | 0.772 |
SFF13662.1 | SFE85901.1 | SAMN05421541_106312 | SAMN05421541_10481 | WD40 repeat. | Predicted ATPase. | 0.781 |
SFF13662.1 | SFF58333.1 | SAMN05421541_106312 | SAMN05421541_11435 | WD40 repeat. | Signal transduction histidine kinase. | 0.633 |
SFF13662.1 | alaS | SAMN05421541_106312 | SAMN05421541_10551 | WD40 repeat. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.837 |
SFF13662.1 | alaS-2 | SAMN05421541_106312 | SAMN05421541_108123 | WD40 repeat. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.837 |
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