STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF00763.1Hypothetical protein. (816 aa)    
Predicted Functional Partners:
SFF00749.1
Excreted virulence factor EspC, type VII ESX diderm.
       0.773
SFF11245.1
Peptidase inhibitor family I36.
  
 
 0.625
SFF41837.1
Hypothetical protein.
  
 
 0.625
SFF41921.1
Meckel syndrome type 1 protein.
  
 
 0.625
smc
Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.
  
 
 0.625
SFF00770.1
Hypothetical protein.
       0.509
SFF00734.1
ATP-dependent DNA helicase RecQ.
       0.476
SFF00717.1
F420-dependent oxidoreductase, G6PDH family.
       0.468
SFF56444.1
Protein of unknown function.
  
 
 0.457
SFF00710.1
Hypothetical protein.
       0.444
Your Current Organism:
Actinoplanes philippinensis
NCBI taxonomy Id: 35752
Other names: A. philippinensis, ATCC 12427, DSM 43019, IFO 13878, JCM 3001, NBRC 13878, NRRL 2506, VKM Ac-842
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.