STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF05474.1Peptide/nickel transport system permease protein. (340 aa)    
Predicted Functional Partners:
SFF05488.1
Peptide/nickel transport system substrate-binding protein.
 
 0.954
SFF05532.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 0.945
SFF05501.1
Peptide/nickel transport system permease protein.
 
 0.940
SFF05516.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.931
SFF02537.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain-containing protein; Belongs to the ABC transporter superfamily.
 
 0.920
SFF43020.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 0.910
SFF51717.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.900
SFF43030.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.898
SFF28291.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.896
SFF14009.1
Peptide/nickel transport system ATP-binding protein.
 
 0.891
Your Current Organism:
Actinoplanes philippinensis
NCBI taxonomy Id: 35752
Other names: A. philippinensis, ATCC 12427, DSM 43019, IFO 13878, JCM 3001, NBRC 13878, NRRL 2506, VKM Ac-842
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