Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFF06099.1 | SFF06112.1 | SAMN05421541_105500 | SAMN05421541_105501 | Hypothetical protein. | RNA polymerase sigma-70 factor, sigma-E family. | 0.538 |
SFF06099.1 | SFF06129.1 | SAMN05421541_105500 | SAMN05421541_105502 | Hypothetical protein. | Hypothetical protein. | 0.538 |
SFF06112.1 | SFF06099.1 | SAMN05421541_105501 | SAMN05421541_105500 | RNA polymerase sigma-70 factor, sigma-E family. | Hypothetical protein. | 0.538 |
SFF06112.1 | SFF06129.1 | SAMN05421541_105501 | SAMN05421541_105502 | RNA polymerase sigma-70 factor, sigma-E family. | Hypothetical protein. | 0.787 |
SFF06112.1 | SFF10068.1 | SAMN05421541_105501 | SAMN05421541_10631 | RNA polymerase sigma-70 factor, sigma-E family. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.650 |
SFF06112.1 | SFF30283.1 | SAMN05421541_105501 | SAMN05421541_108289 | RNA polymerase sigma-70 factor, sigma-E family. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.538 |
SFF06112.1 | SFF53708.1 | SAMN05421541_105501 | SAMN05421541_112292 | RNA polymerase sigma-70 factor, sigma-E family. | Hypothetical protein. | 0.751 |
SFF06112.1 | SFF61851.1 | SAMN05421541_105501 | SAMN05421541_11591 | RNA polymerase sigma-70 factor, sigma-E family. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.552 |
SFF06112.1 | rpoA | SAMN05421541_105501 | SAMN05421541_110271 | RNA polymerase sigma-70 factor, sigma-E family. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.633 |
SFF06112.1 | rpoB | SAMN05421541_105501 | SAMN05421541_110309 | RNA polymerase sigma-70 factor, sigma-E family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.665 |
SFF06112.1 | rpoC | SAMN05421541_105501 | SAMN05421541_110308 | RNA polymerase sigma-70 factor, sigma-E family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.673 |
SFF06112.1 | rpoZ | SAMN05421541_105501 | SAMN05421541_10527 | RNA polymerase sigma-70 factor, sigma-E family. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.633 |
SFF06129.1 | SFF06099.1 | SAMN05421541_105502 | SAMN05421541_105500 | Hypothetical protein. | Hypothetical protein. | 0.538 |
SFF06129.1 | SFF06112.1 | SAMN05421541_105502 | SAMN05421541_105501 | Hypothetical protein. | RNA polymerase sigma-70 factor, sigma-E family. | 0.787 |
SFF10068.1 | SFF06112.1 | SAMN05421541_10631 | SAMN05421541_105501 | RNA polymerase sigma-70 factor, ECF subfamily. | RNA polymerase sigma-70 factor, sigma-E family. | 0.650 |
SFF10068.1 | SFF30283.1 | SAMN05421541_10631 | SAMN05421541_108289 | RNA polymerase sigma-70 factor, ECF subfamily. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.686 |
SFF10068.1 | SFF53708.1 | SAMN05421541_10631 | SAMN05421541_112292 | RNA polymerase sigma-70 factor, ECF subfamily. | Hypothetical protein. | 0.751 |
SFF10068.1 | SFF61851.1 | SAMN05421541_10631 | SAMN05421541_11591 | RNA polymerase sigma-70 factor, ECF subfamily. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.531 |
SFF10068.1 | rpoA | SAMN05421541_10631 | SAMN05421541_110271 | RNA polymerase sigma-70 factor, ECF subfamily. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.633 |
SFF10068.1 | rpoB | SAMN05421541_10631 | SAMN05421541_110309 | RNA polymerase sigma-70 factor, ECF subfamily. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.665 |
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