STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF09700.1Endo-1,4-beta-xylanase. (167 aa)    
Predicted Functional Partners:
SFF89519.1
Endo-1,4-beta-xylanase.
 
     0.834
SFE85787.1
Endo-1,4-beta-xylanase, GH35 family.
  
     0.752
SFF09718.1
Hypothetical protein.
 
     0.715
SFF22344.1
Cellulose binding domain-containing protein.
  
     0.694
SFE93947.1
Esterase, PHB depolymerase family.
 
   0.670
SFE85804.1
Cellulose binding domain-containing protein.
 
   0.645
SFF42115.1
Hypothetical protein.
    
   0.636
SFE94669.1
Cellulose binding domain-containing protein.
 
   0.634
SFE85475.1
Endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
     0.631
SFF29904.1
Ricin-type beta-trefoil lectin domain-like.
 
   0.630
Your Current Organism:
Actinoplanes philippinensis
NCBI taxonomy Id: 35752
Other names: A. philippinensis, ATCC 12427, DSM 43019, IFO 13878, JCM 3001, NBRC 13878, NRRL 2506, VKM Ac-842
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.