STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF10935.1Signal transduction histidine kinase. (449 aa)    
Predicted Functional Partners:
SFF30829.1
Response regulator receiver domain-containing protein.
 
 0.977
SFF75277.1
Signal transduction histidine kinase.
 
0.971
SFF24060.1
PAS domain S-box-containing protein.
 
0.969
SFE50799.1
PAS domain S-box-containing protein.
 
 0.948
SFF56810.1
Hypothetical protein/two-component system, OmpR family, KDP operon response regulator KdpE.
 
 
 0.947
SFF58333.1
Signal transduction histidine kinase.
  
0.944
SFF61770.1
GAF domain-containing protein.
 
 0.938
SFF10915.1
Two-component system, OmpR family, response regulator.
 
  0.929
SFE32795.1
Signal transduction histidine kinase.
 
 
 0.906
SFF37454.1
PAS domain S-box-containing protein.
 
 
0.886
Your Current Organism:
Actinoplanes philippinensis
NCBI taxonomy Id: 35752
Other names: A. philippinensis, ATCC 12427, DSM 43019, IFO 13878, JCM 3001, NBRC 13878, NRRL 2506, VKM Ac-842
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