STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF15035.1Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family. (552 aa)    
Predicted Functional Partners:
SFF92445.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
  
     0.758
SFF15027.1
Membrane protein DedA, SNARE-associated domain.
       0.628
SFF64649.1
Endoglucanase.
 
 
 0.584
SFF34098.1
Aryl-phospho-beta-D-glucosidase BglC, GH1 family.
 
 0.573
SFF12854.1
Polysaccharide deacetylase.
  
     0.544
SFF61687.1
Aryl-phospho-beta-D-glucosidase BglC, GH1 family; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
 0.542
SFF48319.1
Polysaccharide deacetylase.
 
 
0.493
SFF62006.1
Pectinesterase.
    
 0.461
SFE85475.1
Endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
 
     0.439
SFF15014.1
Hypothetical protein.
       0.434
Your Current Organism:
Actinoplanes philippinensis
NCBI taxonomy Id: 35752
Other names: A. philippinensis, ATCC 12427, DSM 43019, IFO 13878, JCM 3001, NBRC 13878, NRRL 2506, VKM Ac-842
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.