Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFF21029.1 | SFF21043.1 | SAMN05421541_107186 | SAMN05421541_107187 | Conserved DNA-binding protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | Hypothetical protein. | 0.533 |
SFF21029.1 | SFF21056.1 | SAMN05421541_107186 | SAMN05421541_107188 | Conserved DNA-binding protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | Glycosyltransferase involved in cell wall bisynthesis. | 0.427 |
SFF21029.1 | SFF21069.1 | SAMN05421541_107186 | SAMN05421541_107189 | Conserved DNA-binding protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | Membrane protein involved in the export of O-antigen and teichoic acid. | 0.427 |
SFF21043.1 | SFF21029.1 | SAMN05421541_107187 | SAMN05421541_107186 | Hypothetical protein. | Conserved DNA-binding protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | 0.533 |
SFF21043.1 | SFF21056.1 | SAMN05421541_107187 | SAMN05421541_107188 | Hypothetical protein. | Glycosyltransferase involved in cell wall bisynthesis. | 0.603 |
SFF21043.1 | SFF21069.1 | SAMN05421541_107187 | SAMN05421541_107189 | Hypothetical protein. | Membrane protein involved in the export of O-antigen and teichoic acid. | 0.603 |
SFF21056.1 | SFF21029.1 | SAMN05421541_107188 | SAMN05421541_107186 | Glycosyltransferase involved in cell wall bisynthesis. | Conserved DNA-binding protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | 0.427 |
SFF21056.1 | SFF21043.1 | SAMN05421541_107188 | SAMN05421541_107187 | Glycosyltransferase involved in cell wall bisynthesis. | Hypothetical protein. | 0.603 |
SFF21056.1 | SFF21069.1 | SAMN05421541_107188 | SAMN05421541_107189 | Glycosyltransferase involved in cell wall bisynthesis. | Membrane protein involved in the export of O-antigen and teichoic acid. | 0.844 |
SFF21069.1 | SFF21029.1 | SAMN05421541_107189 | SAMN05421541_107186 | Membrane protein involved in the export of O-antigen and teichoic acid. | Conserved DNA-binding protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | 0.427 |
SFF21069.1 | SFF21043.1 | SAMN05421541_107189 | SAMN05421541_107187 | Membrane protein involved in the export of O-antigen and teichoic acid. | Hypothetical protein. | 0.603 |
SFF21069.1 | SFF21056.1 | SAMN05421541_107189 | SAMN05421541_107188 | Membrane protein involved in the export of O-antigen and teichoic acid. | Glycosyltransferase involved in cell wall bisynthesis. | 0.844 |