STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF28697.1Hypothetical protein. (426 aa)    
Predicted Functional Partners:
SFF28688.1
Hypothetical protein.
 
   
 0.923
SFF28667.1
Hypothetical protein.
 
   
 0.906
SFF28678.1
Conserved hypothetical phage tail region protein.
 
   
 0.901
SFF28623.1
Uncharacterized conserved protein, implicated in type VI secretion and phage assembly.
 
   
 0.864
SFF28598.1
Phage tail protein domain-containing protein.
 
     0.838
SFF28643.1
Conserved hypothetical phage tail region protein.
 
   
 0.833
SFF28604.1
Putative baseplate assembly protein.
 
     0.832
SFF28634.1
LysM domain-containing protein.
 
     0.830
SFF28617.1
Hypothetical protein.
 
     0.828
SFF28579.1
Protein of unknown function.
 
    0.814
Your Current Organism:
Actinoplanes philippinensis
NCBI taxonomy Id: 35752
Other names: A. philippinensis, ATCC 12427, DSM 43019, IFO 13878, JCM 3001, NBRC 13878, NRRL 2506, VKM Ac-842
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