STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF31021.1Membrane protein DedA, SNARE-associated domain. (204 aa)    
Predicted Functional Partners:
SFF66937.1
Membrane-associated protein.
  
     0.725
SFF60286.1
Membrane protein DedA, SNARE-associated domain.
  
     0.662
SFF53420.1
Flagellar basal-body rod protein FlgC.
   
   0.661
SFF31029.1
Predicted oxidoreductase.
       0.658
SFF48297.1
Membrane protein DedA, SNARE-associated domain.
  
     0.638
SFF31010.1
Predicted arabinose efflux permease, MFS family.
       0.535
SFF31040.1
Methyl-accepting chemotaxis protein.
       0.518
Your Current Organism:
Actinoplanes philippinensis
NCBI taxonomy Id: 35752
Other names: A. philippinensis, ATCC 12427, DSM 43019, IFO 13878, JCM 3001, NBRC 13878, NRRL 2506, VKM Ac-842
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.