STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF35205.1Hypothetical protein. (234 aa)    
Predicted Functional Partners:
SFF35190.1
Hypothetical protein.
 
     0.800
SFF35194.1
Predicted phosphodiesterase.
       0.787
SFF35168.1
Calcineurin-like phosphoesterase.
 
     0.616
SFF35212.1
Hypothetical protein.
       0.552
SFF35179.1
GrpB domain, predicted nucleotidyltransferase, UPF0157 family.
       0.503
SFE37303.1
TIGR03086 family protein.
  
     0.488
SFF92464.1
Bacterioferritin-associated ferredoxin.
  
    0.479
SFF64770.1
Protein of unknown function.
  
     0.465
SFE33509.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
  
     0.453
SFF91594.1
Uncaracterized surface protein containing fasciclin (FAS1) repeats.
  
     0.435
Your Current Organism:
Actinoplanes philippinensis
NCBI taxonomy Id: 35752
Other names: A. philippinensis, ATCC 12427, DSM 43019, IFO 13878, JCM 3001, NBRC 13878, NRRL 2506, VKM Ac-842
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.