STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF34240.1DNA-binding transcriptional regulator, ArsR family. (339 aa)    
Predicted Functional Partners:
SFF34252.1
Predicted arabinose efflux permease, MFS family.
 
     0.927
SFE30299.1
Major Facilitator Superfamily protein.
 
     0.748
SFE70783.1
Major Facilitator Superfamily protein.
 
     0.634
SFE85520.1
Hypothetical protein.
  
     0.619
SFF27154.1
Major Facilitator Superfamily protein.
 
     0.616
SFF22158.1
Major Facilitator Superfamily protein.
  
     0.548
SFF79945.1
Hypothetical protein.
  
     0.526
SFF86104.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
  
     0.510
SFF38038.1
Helix-turn-helix domain-containing protein.
  
     0.497
SFF35260.1
Protein N-acetyltransferase, RimJ/RimL family.
  
     0.496
Your Current Organism:
Actinoplanes philippinensis
NCBI taxonomy Id: 35752
Other names: A. philippinensis, ATCC 12427, DSM 43019, IFO 13878, JCM 3001, NBRC 13878, NRRL 2506, VKM Ac-842
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.