STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF37661.1DNA-binding transcriptional regulator, AcrR family. (203 aa)    
Predicted Functional Partners:
SFF89191.1
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon.
  
     0.759
SFF37671.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
     0.689
SFF52975.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.478
SFF64436.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.416
SFE86593.1
3-methyladenine DNA glycosylase AlkC.
 
     0.414
SFF64427.1
Alkylhydroperoxidase AhpD family core domain-containing protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
  
     0.403
Your Current Organism:
Actinoplanes philippinensis
NCBI taxonomy Id: 35752
Other names: A. philippinensis, ATCC 12427, DSM 43019, IFO 13878, JCM 3001, NBRC 13878, NRRL 2506, VKM Ac-842
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