STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF44593.1Hypothetical protein. (317 aa)    
Predicted Functional Partners:
SFF44603.1
Hypothetical protein.
 
     0.849
SFF44532.1
Bifunctional DNA primase/polymerase, N-terminal.
 
   
 0.764
SFE93931.1
Hypothetical protein.
  
     0.703
SFE91317.1
Hypothetical protein.
  
     0.691
SFF44606.1
Hypothetical protein.
       0.664
SFF28940.1
DNA-binding transcriptional regulator, AcrR family.
  
     0.657
SFF13998.1
L-amino acid N-acyltransferase YncA.
  
     0.623
SFF34836.1
NUDIX domain-containing protein; Belongs to the Nudix hydrolase family.
  
     0.603
SFF44568.1
Protein of unknown function.
       0.558
SFF44574.1
Hypothetical protein.
       0.538
Your Current Organism:
Actinoplanes philippinensis
NCBI taxonomy Id: 35752
Other names: A. philippinensis, ATCC 12427, DSM 43019, IFO 13878, JCM 3001, NBRC 13878, NRRL 2506, VKM Ac-842
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.