STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF45420.1Hemolysin-type calcium-binding repeat-containing protein. (494 aa)    
Predicted Functional Partners:
SFF45411.1
FG-GAP repeat-containing protein.
       0.768
SFF45429.1
Mannosyltransferase.
       0.762
SFF44416.1
Phage major capsid protein, HK97 family.
 
 
   0.689
SFF64589.1
Hypothetical protein.
   
   0.629
SFE39092.1
Fibronectin type III domain-containing protein.
   
  0.540
SFF34207.1
Hypothetical protein.
   
  0.540
SFF52630.1
Conserved repeat domain-containing protein.
 
  0.533
SFE52187.1
Conserved repeat domain-containing protein.
 
  0.530
SFF28459.1
Serine protease, subtilisin family; Belongs to the peptidase S8 family.
   
 
  0.457
SFF53543.1
Serine protease, subtilisin family; Belongs to the peptidase S8 family.
   
 
  0.457
Your Current Organism:
Actinoplanes philippinensis
NCBI taxonomy Id: 35752
Other names: A. philippinensis, ATCC 12427, DSM 43019, IFO 13878, JCM 3001, NBRC 13878, NRRL 2506, VKM Ac-842
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.