STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF51727.1Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (370 aa)    
Predicted Functional Partners:
SFF51710.1
Peptide/nickel transport system permease protein.
 
 0.986
SFF51704.1
Peptide/nickel transport system permease protein.
 
 0.977
SFF51695.1
Peptide/nickel transport system substrate-binding protein.
 
 
 0.936
SFF64808.1
Peptide/nickel transport system permease protein.
 
 0.927
SFF28302.1
Peptide/nickel transport system permease protein.
 
 0.916
SFF64748.1
Peptide/nickel transport system permease protein.
 
 0.910
SFF64948.1
Peptide/nickel transport system permease protein.
 
 0.903
SFF38919.1
Peptide/nickel transport system permease protein.
 
 0.895
SFF23118.1
Peptide/nickel transport system permease protein.
 
 0.894
SFF05474.1
Peptide/nickel transport system permease protein.
 
 0.888
Your Current Organism:
Actinoplanes philippinensis
NCBI taxonomy Id: 35752
Other names: A. philippinensis, ATCC 12427, DSM 43019, IFO 13878, JCM 3001, NBRC 13878, NRRL 2506, VKM Ac-842
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.