STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF52583.1L-amino acid N-acyltransferase YncA. (305 aa)    
Predicted Functional Partners:
SFE79375.1
Uncharacterized conserved protein, DUF1778 family.
   
   0.708
SFF44603.1
Hypothetical protein.
  
     0.682
SFF52555.1
ABC-2 type transport system ATP-binding protein.
  
    0.643
SFF52562.1
ABC-2 type transport system permease protein.
       0.639
SFF63919.1
Protein of unknown function.
  
     0.520
SFF87901.1
Chloramphenicol 3-O phosphotransferase.
  
     0.491
SFF53959.1
Hypothetical protein.
  
     0.472
SFF81183.1
Protein of unknown function.
  
     0.468
SFF65146.1
Protein of unknown function.
  
     0.459
SFF52549.1
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
       0.454
Your Current Organism:
Actinoplanes philippinensis
NCBI taxonomy Id: 35752
Other names: A. philippinensis, ATCC 12427, DSM 43019, IFO 13878, JCM 3001, NBRC 13878, NRRL 2506, VKM Ac-842
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