STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF57221.1Peptidase family M23. (154 aa)    
Predicted Functional Partners:
SFF57229.1
Protein of unknown function.
 
     0.720
rnhB
RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.613
SFF53257.1
Flagellar motor switch protein FliM.
    
   0.601
SFE99903.1
Cyanophycin synthetase; Belongs to the MurCDEF family.
    
 0.505
SFF57255.1
Signal peptidase I; Belongs to the peptidase S26 family.
  
  
 0.416
disA
Diadenylate cyclase; Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c-di-AMP likely acts as a signaling molecule that may couple DNA integrity with a cellular process.
     
 0.406
SFF56146.1
Protein of unknown function.
  
     0.402
Your Current Organism:
Actinoplanes philippinensis
NCBI taxonomy Id: 35752
Other names: A. philippinensis, ATCC 12427, DSM 43019, IFO 13878, JCM 3001, NBRC 13878, NRRL 2506, VKM Ac-842
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