Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFE99903.1 | SFF57221.1 | SAMN05421541_10587 | SAMN05421541_113275 | Cyanophycin synthetase; Belongs to the MurCDEF family. | Peptidase family M23. | 0.505 |
SFF53257.1 | SFF57221.1 | SAMN05421541_112239 | SAMN05421541_113275 | Flagellar motor switch protein FliM. | Peptidase family M23. | 0.601 |
SFF56146.1 | SFF57221.1 | SAMN05421541_113131 | SAMN05421541_113275 | Protein of unknown function. | Peptidase family M23. | 0.402 |
SFF56146.1 | SFF57229.1 | SAMN05421541_113131 | SAMN05421541_113276 | Protein of unknown function. | Protein of unknown function. | 0.708 |
SFF57221.1 | SFE99903.1 | SAMN05421541_113275 | SAMN05421541_10587 | Peptidase family M23. | Cyanophycin synthetase; Belongs to the MurCDEF family. | 0.505 |
SFF57221.1 | SFF53257.1 | SAMN05421541_113275 | SAMN05421541_112239 | Peptidase family M23. | Flagellar motor switch protein FliM. | 0.601 |
SFF57221.1 | SFF56146.1 | SAMN05421541_113275 | SAMN05421541_113131 | Peptidase family M23. | Protein of unknown function. | 0.402 |
SFF57221.1 | SFF57229.1 | SAMN05421541_113275 | SAMN05421541_113276 | Peptidase family M23. | Protein of unknown function. | 0.720 |
SFF57221.1 | SFF57255.1 | SAMN05421541_113275 | SAMN05421541_113280 | Peptidase family M23. | Signal peptidase I; Belongs to the peptidase S26 family. | 0.416 |
SFF57221.1 | disA | SAMN05421541_113275 | SAMN05421541_11296 | Peptidase family M23. | Diadenylate cyclase; Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c-di-AMP likely acts as a signaling molecule that may couple DNA integrity with a cellular process. | 0.406 |
SFF57221.1 | rnhB | SAMN05421541_113275 | SAMN05421541_113277 | Peptidase family M23. | RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.613 |
SFF57229.1 | SFF56146.1 | SAMN05421541_113276 | SAMN05421541_113131 | Protein of unknown function. | Protein of unknown function. | 0.708 |
SFF57229.1 | SFF57221.1 | SAMN05421541_113276 | SAMN05421541_113275 | Protein of unknown function. | Peptidase family M23. | 0.720 |
SFF57229.1 | rnhB | SAMN05421541_113276 | SAMN05421541_113277 | Protein of unknown function. | RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.905 |
SFF57255.1 | SFF57221.1 | SAMN05421541_113280 | SAMN05421541_113275 | Signal peptidase I; Belongs to the peptidase S26 family. | Peptidase family M23. | 0.416 |
SFF57255.1 | rnhB | SAMN05421541_113280 | SAMN05421541_113277 | Signal peptidase I; Belongs to the peptidase S26 family. | RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.862 |
disA | SFF57221.1 | SAMN05421541_11296 | SAMN05421541_113275 | Diadenylate cyclase; Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c-di-AMP likely acts as a signaling molecule that may couple DNA integrity with a cellular process. | Peptidase family M23. | 0.406 |
rnhB | SFF57221.1 | SAMN05421541_113277 | SAMN05421541_113275 | RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | Peptidase family M23. | 0.613 |
rnhB | SFF57229.1 | SAMN05421541_113277 | SAMN05421541_113276 | RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | Protein of unknown function. | 0.905 |
rnhB | SFF57255.1 | SAMN05421541_113277 | SAMN05421541_113280 | RNase HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | Signal peptidase I; Belongs to the peptidase S26 family. | 0.862 |