Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFE32964.1 | SFE74040.1 | SAMN05421541_101192 | SAMN05421541_103322 | L-lactate dehydrogenase complex protein LldE. | Isocitrate lyase. | 0.757 |
SFE32964.1 | SFF21995.1 | SAMN05421541_101192 | SAMN05421541_107266 | L-lactate dehydrogenase complex protein LldE. | Glycolate oxidase FAD binding subunit. | 0.800 |
SFE32964.1 | SFF36887.1 | SAMN05421541_101192 | SAMN05421541_109269 | L-lactate dehydrogenase complex protein LldE. | 4-hydroxymandelate oxidase. | 0.444 |
SFE32964.1 | SFF59641.1 | SAMN05421541_101192 | SAMN05421541_114189 | L-lactate dehydrogenase complex protein LldE. | Phosphoglycolate phosphatase. | 0.743 |
SFE32964.1 | SFF64875.1 | SAMN05421541_101192 | SAMN05421541_116123 | L-lactate dehydrogenase complex protein LldE. | Glycolate oxidase. | 0.831 |
SFE32964.1 | SFF93088.1 | SAMN05421541_101192 | SAMN05421541_13210 | L-lactate dehydrogenase complex protein LldE. | FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase. | 0.444 |
SFE58858.1 | SFF21995.1 | SAMN05421541_102493 | SAMN05421541_107266 | Ubiquinol-cytochrome c reductase cytochrome c subunit. | Glycolate oxidase FAD binding subunit. | 0.828 |
SFE58858.1 | SFF64875.1 | SAMN05421541_102493 | SAMN05421541_116123 | Ubiquinol-cytochrome c reductase cytochrome c subunit. | Glycolate oxidase. | 0.828 |
SFE58858.1 | SFF64884.1 | SAMN05421541_102493 | SAMN05421541_116124 | Ubiquinol-cytochrome c reductase cytochrome c subunit. | Thiosulfate/3-mercaptopyruvate sulfurtransferase. | 0.479 |
SFE74040.1 | SFE32964.1 | SAMN05421541_103322 | SAMN05421541_101192 | Isocitrate lyase. | L-lactate dehydrogenase complex protein LldE. | 0.757 |
SFE74040.1 | SFF21995.1 | SAMN05421541_103322 | SAMN05421541_107266 | Isocitrate lyase. | Glycolate oxidase FAD binding subunit. | 0.947 |
SFE74040.1 | SFF22005.1 | SAMN05421541_103322 | SAMN05421541_107267 | Isocitrate lyase. | Glycolate oxidase iron-sulfur subunit. | 0.943 |
SFE74040.1 | SFF64875.1 | SAMN05421541_103322 | SAMN05421541_116123 | Isocitrate lyase. | Glycolate oxidase. | 0.817 |
SFF21995.1 | SFE32964.1 | SAMN05421541_107266 | SAMN05421541_101192 | Glycolate oxidase FAD binding subunit. | L-lactate dehydrogenase complex protein LldE. | 0.800 |
SFF21995.1 | SFE58858.1 | SAMN05421541_107266 | SAMN05421541_102493 | Glycolate oxidase FAD binding subunit. | Ubiquinol-cytochrome c reductase cytochrome c subunit. | 0.828 |
SFF21995.1 | SFE74040.1 | SAMN05421541_107266 | SAMN05421541_103322 | Glycolate oxidase FAD binding subunit. | Isocitrate lyase. | 0.947 |
SFF21995.1 | SFF22005.1 | SAMN05421541_107266 | SAMN05421541_107267 | Glycolate oxidase FAD binding subunit. | Glycolate oxidase iron-sulfur subunit. | 0.994 |
SFF21995.1 | SFF23408.1 | SAMN05421541_107266 | SAMN05421541_107375 | Glycolate oxidase FAD binding subunit. | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.948 |
SFF21995.1 | SFF36887.1 | SAMN05421541_107266 | SAMN05421541_109269 | Glycolate oxidase FAD binding subunit. | 4-hydroxymandelate oxidase. | 0.825 |
SFF21995.1 | SFF59641.1 | SAMN05421541_107266 | SAMN05421541_114189 | Glycolate oxidase FAD binding subunit. | Phosphoglycolate phosphatase. | 0.853 |
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