STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF65565.1Predicted amidohydrolase. (275 aa)    
Predicted Functional Partners:
SFF65583.1
Putative N-acetyltransferase, MSMEG_0567 N-terminal domain family.
 
   
 0.954
SFF65600.1
MSMEG_0572 family protein.
 
   
 0.951
SFF65591.1
Radical SAM protein, MSMEG_0568 family.
 
     0.949
SFF65557.1
Glycosyltransferase, MSMEG_0565 family.
 
    0.946
SFF65607.1
Predicted metal-dependent hydrolase, TIM-barrel fold.
 
    0.945
SFF65614.1
Putative flavoprotein involved in K+ transport.
 
 
 0.934
SFF65622.1
MSMEG_0570 family protein.
 
 
  0.927
SFE55833.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.797
SFF65575.1
Predicted amidohydrolase.
 
    
0.781
SFF15399.1
Agmatine deiminase; Belongs to the agmatine deiminase family.
 
 
 0.741
Your Current Organism:
Actinoplanes philippinensis
NCBI taxonomy Id: 35752
Other names: A. philippinensis, ATCC 12427, DSM 43019, IFO 13878, JCM 3001, NBRC 13878, NRRL 2506, VKM Ac-842
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