STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF64378.1AAA ATPase domain-containing protein. (883 aa)    
Predicted Functional Partners:
SFF64387.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  
  0.782
SFF27187.1
Hypothetical protein.
  
     0.687
SFE40531.1
Hypothetical protein.
  
     0.652
SFF34207.1
Hypothetical protein.
  
     0.628
SFE71706.1
HSP20 family protein; Belongs to the small heat shock protein (HSP20) family.
    
   0.606
SFF05564.1
HSP20 family protein; Belongs to the small heat shock protein (HSP20) family.
    
   0.606
SFF23434.1
HSP20 family protein; Belongs to the small heat shock protein (HSP20) family.
    
   0.606
SFF37344.1
Regulatory protein, luxR family.
 
  
  0.572
SFF42230.1
Hypothetical protein.
  
     0.552
SFE79141.1
phenylacetate-CoA ligase.
  
     0.531
Your Current Organism:
Actinoplanes philippinensis
NCBI taxonomy Id: 35752
Other names: A. philippinensis, ATCC 12427, DSM 43019, IFO 13878, JCM 3001, NBRC 13878, NRRL 2506, VKM Ac-842
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