STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF69368.1F5/8 type C domain-containing protein. (571 aa)    
Predicted Functional Partners:
SFF48737.1
Glycosyl hydrolases family 16.
 
     0.666
SFE90016.1
Chitinase, GH18 family; Belongs to the glycosyl hydrolase 18 family.
 
    0.625
SFF41929.1
Glucosylceramidase; Belongs to the glycosyl hydrolase 30 family.
   
 0.606
SFE70818.1
Glucosylceramidase; Belongs to the glycosyl hydrolase 30 family.
 
   
 0.578
SFF10204.1
Carbohydrate binding module (family 6).
  
     0.573
SFE89855.1
Uncharacterized conserved protein, DUF305 family.
 
     0.568
SFF30025.1
Ricin-type beta-trefoil lectin domain-containing protein.
 
     0.548
SFF64649.1
Endoglucanase.
   
 0.540
SFF19136.1
Carbohydrate binding module (family 6).
  
     0.518
SFF77790.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
  
     0.512
Your Current Organism:
Actinoplanes philippinensis
NCBI taxonomy Id: 35752
Other names: A. philippinensis, ATCC 12427, DSM 43019, IFO 13878, JCM 3001, NBRC 13878, NRRL 2506, VKM Ac-842
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