Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFF74241.1 | SFF74252.1 | SAMN05421541_12026 | SAMN05421541_12027 | RNA polymerase sigma-70 factor, ECF subfamily. | Hypothetical protein. | 0.773 |
SFF74241.1 | SFF74264.1 | SAMN05421541_12026 | SAMN05421541_12028 | RNA polymerase sigma-70 factor, ECF subfamily. | Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains. | 0.547 |
SFF74241.1 | SFF74276.1 | SAMN05421541_12026 | SAMN05421541_12029 | RNA polymerase sigma-70 factor, ECF subfamily. | Hypothetical protein. | 0.547 |
SFF74241.1 | SFF74288.1 | SAMN05421541_12026 | SAMN05421541_12030 | RNA polymerase sigma-70 factor, ECF subfamily. | Protein of unknown function. | 0.407 |
SFF74252.1 | SFF74241.1 | SAMN05421541_12027 | SAMN05421541_12026 | Hypothetical protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.773 |
SFF74252.1 | SFF74264.1 | SAMN05421541_12027 | SAMN05421541_12028 | Hypothetical protein. | Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains. | 0.547 |
SFF74252.1 | SFF74276.1 | SAMN05421541_12027 | SAMN05421541_12029 | Hypothetical protein. | Hypothetical protein. | 0.547 |
SFF74252.1 | SFF74288.1 | SAMN05421541_12027 | SAMN05421541_12030 | Hypothetical protein. | Protein of unknown function. | 0.407 |
SFF74264.1 | SFF74241.1 | SAMN05421541_12028 | SAMN05421541_12026 | Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.547 |
SFF74264.1 | SFF74252.1 | SAMN05421541_12028 | SAMN05421541_12027 | Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains. | Hypothetical protein. | 0.547 |
SFF74264.1 | SFF74276.1 | SAMN05421541_12028 | SAMN05421541_12029 | Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains. | Hypothetical protein. | 0.773 |
SFF74264.1 | SFF74288.1 | SAMN05421541_12028 | SAMN05421541_12030 | Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains. | Protein of unknown function. | 0.558 |
SFF74276.1 | SFF74241.1 | SAMN05421541_12029 | SAMN05421541_12026 | Hypothetical protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.547 |
SFF74276.1 | SFF74252.1 | SAMN05421541_12029 | SAMN05421541_12027 | Hypothetical protein. | Hypothetical protein. | 0.547 |
SFF74276.1 | SFF74264.1 | SAMN05421541_12029 | SAMN05421541_12028 | Hypothetical protein. | Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains. | 0.773 |
SFF74276.1 | SFF74288.1 | SAMN05421541_12029 | SAMN05421541_12030 | Hypothetical protein. | Protein of unknown function. | 0.558 |
SFF74288.1 | SFF74241.1 | SAMN05421541_12030 | SAMN05421541_12026 | Protein of unknown function. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.407 |
SFF74288.1 | SFF74252.1 | SAMN05421541_12030 | SAMN05421541_12027 | Protein of unknown function. | Hypothetical protein. | 0.407 |
SFF74288.1 | SFF74264.1 | SAMN05421541_12030 | SAMN05421541_12028 | Protein of unknown function. | Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains. | 0.558 |
SFF74288.1 | SFF74276.1 | SAMN05421541_12030 | SAMN05421541_12029 | Protein of unknown function. | Hypothetical protein. | 0.558 |