Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFF10473.1 | SFF77832.1 | SAMN05421541_10665 | SAMN05421541_121127 | Bacteriocin biosynthesis cyclodehydratase domain-containing protein. | Hypothetical protein. | 0.864 |
SFF44920.1 | SFF77832.1 | SAMN05421541_110401 | SAMN05421541_121127 | Adenylyltransferase and sulfurtransferase. | Hypothetical protein. | 0.864 |
SFF48936.1 | SFF77832.1 | SAMN05421541_111247 | SAMN05421541_121127 | Molybdopterin or thiamine biosynthesis adenylyltransferase. | Hypothetical protein. | 0.864 |
SFF77817.1 | SFF77832.1 | SAMN05421541_121126 | SAMN05421541_121127 | DNA-binding transcriptional regulator, MarR family. | Hypothetical protein. | 0.465 |
SFF77817.1 | SFF77845.1 | SAMN05421541_121126 | SAMN05421541_121128 | DNA-binding transcriptional regulator, MarR family. | Hypothetical protein. | 0.430 |
SFF77832.1 | SFF10473.1 | SAMN05421541_121127 | SAMN05421541_10665 | Hypothetical protein. | Bacteriocin biosynthesis cyclodehydratase domain-containing protein. | 0.864 |
SFF77832.1 | SFF44920.1 | SAMN05421541_121127 | SAMN05421541_110401 | Hypothetical protein. | Adenylyltransferase and sulfurtransferase. | 0.864 |
SFF77832.1 | SFF48936.1 | SAMN05421541_121127 | SAMN05421541_111247 | Hypothetical protein. | Molybdopterin or thiamine biosynthesis adenylyltransferase. | 0.864 |
SFF77832.1 | SFF77817.1 | SAMN05421541_121127 | SAMN05421541_121126 | Hypothetical protein. | DNA-binding transcriptional regulator, MarR family. | 0.465 |
SFF77832.1 | SFF77845.1 | SAMN05421541_121127 | SAMN05421541_121128 | Hypothetical protein. | Hypothetical protein. | 0.735 |
SFF77845.1 | SFF77817.1 | SAMN05421541_121128 | SAMN05421541_121126 | Hypothetical protein. | DNA-binding transcriptional regulator, MarR family. | 0.430 |
SFF77845.1 | SFF77832.1 | SAMN05421541_121128 | SAMN05421541_121127 | Hypothetical protein. | Hypothetical protein. | 0.735 |