STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF77122.1Catechol 2,3-dioxygenase. (127 aa)    
Predicted Functional Partners:
SFF77133.1
Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
     0.911
SFF77112.1
Chromate transporter.
 
     0.821
SFF77144.1
AraC-type DNA-binding protein.
       0.569
SFF94107.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
  
  
  0.509
SFF58159.1
Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding.
  
    0.493
SFF66733.1
Helix-turn-helix domain-containing protein.
  
     0.443
SFF77229.1
Ketosteroid isomerase homolog.
 
 
  0.443
SFF30714.1
Hypothetical protein.
  
     0.421
SFF84031.1
FR47-like protein.
  
     0.414
Your Current Organism:
Actinoplanes philippinensis
NCBI taxonomy Id: 35752
Other names: A. philippinensis, ATCC 12427, DSM 43019, IFO 13878, JCM 3001, NBRC 13878, NRRL 2506, VKM Ac-842
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.