STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF79657.1Membrane carboxypeptidase (penicillin-binding protein). (777 aa)    
Predicted Functional Partners:
SFE57059.1
Cell division protein FtsI (penicillin-binding protein 3).
 
 
 0.901
SFF47568.1
Cell division protein FtsI/penicillin-binding protein 2.
 
 
 0.858
SFF67436.1
Peptidoglycan glycosyltransferase.
 
 
0.857
SFF02223.1
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.
 
 
 0.805
SFE56988.1
Cell division protein FtsW; Belongs to the SEDS family.
  
 
 
 0.759
SFE42884.1
DivIVA domain-containing protein.
   
 
 0.718
SFE56843.1
DivIVA domain-containing protein.
   
 
 0.718
SFE79487.1
Hypothetical protein.
   
 
 0.718
SFF16143.1
DivIVA domain-containing protein.
   
 
 0.718
SFF20218.1
DivIVA domain-containing protein.
   
 
 0.718
Your Current Organism:
Actinoplanes philippinensis
NCBI taxonomy Id: 35752
Other names: A. philippinensis, ATCC 12427, DSM 43019, IFO 13878, JCM 3001, NBRC 13878, NRRL 2506, VKM Ac-842
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.