STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF80680.1Zinc transport system ATP-binding protein. (260 aa)    
Predicted Functional Partners:
SFF80665.1
Zinc transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.999
SFF80692.1
Zinc transport system permease protein.
 
 0.999
SFF65474.1
Manganese/iron transport system permease protein.
 
 0.985
SFF65387.1
Manganese/iron transport system permease protein.
 
 0.983
SFF65377.1
ABC-type Mn2+/Zn2+ transport system, permease component.
 
 0.981
SFF80720.1
Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family.
  
  
 0.941
SFF65401.1
Zinc/manganese transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.936
SFF65449.1
Anchored repeat ABC transporter, substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.928
SFF80704.1
DNA-binding transcriptional regulator, ArsR family.
       0.738
SFF80736.1
Hypothetical protein.
       0.737
Your Current Organism:
Actinoplanes philippinensis
NCBI taxonomy Id: 35752
Other names: A. philippinensis, ATCC 12427, DSM 43019, IFO 13878, JCM 3001, NBRC 13878, NRRL 2506, VKM Ac-842
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.