STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF80774.1Energy-coupling factor transport system substrate-specific component. (195 aa)    
Predicted Functional Partners:
SFF80797.1
Energy-coupling factor transport system permease protein.
 
  
 0.987
SFF80785.1
Energy-coupling factor transport system ATP-binding protein.
 
  
 0.964
SFF91470.1
Energy-coupling factor transport system permease protein.
 
  
 0.816
SFF91484.1
Energy-coupling factor transport system ATP-binding protein.
 
  
 0.653
SFF80811.1
Hypothetical protein.
       0.628
SFF80825.1
Hypothetical protein.
       0.613
thiC
Phosphomethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.
   
  
 0.589
SFF43721.1
Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase.
  
    0.486
SFF03393.1
Nicotinamide mononucleotide transporter.
 
   
 0.480
SFF80760.1
Pimeloyl-ACP methyl ester carboxylesterase.
       0.477
Your Current Organism:
Actinoplanes philippinensis
NCBI taxonomy Id: 35752
Other names: A. philippinensis, ATCC 12427, DSM 43019, IFO 13878, JCM 3001, NBRC 13878, NRRL 2506, VKM Ac-842
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.