Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFF73181.1 | SFF98179.1 | SAMN05421541_119159 | SAMN05421541_13810 | PAP2 superfamily protein. | Putative drug exporter of the RND superfamily. | 0.417 |
SFF98117.1 | SFF98157.1 | SAMN05421541_1387 | SAMN05421541_1388 | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | Histidine kinase. | 0.890 |
SFF98117.1 | SFF98166.1 | SAMN05421541_1387 | SAMN05421541_1389 | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.773 |
SFF98117.1 | SFF98179.1 | SAMN05421541_1387 | SAMN05421541_13810 | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | Putative drug exporter of the RND superfamily. | 0.513 |
SFF98117.1 | SFF98191.1 | SAMN05421541_1387 | SAMN05421541_13811 | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | Polyketide cyclase / dehydrase and lipid transport. | 0.435 |
SFF98157.1 | SFF98117.1 | SAMN05421541_1388 | SAMN05421541_1387 | Histidine kinase. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.890 |
SFF98157.1 | SFF98166.1 | SAMN05421541_1388 | SAMN05421541_1389 | Histidine kinase. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.773 |
SFF98157.1 | SFF98179.1 | SAMN05421541_1388 | SAMN05421541_13810 | Histidine kinase. | Putative drug exporter of the RND superfamily. | 0.513 |
SFF98157.1 | SFF98191.1 | SAMN05421541_1388 | SAMN05421541_13811 | Histidine kinase. | Polyketide cyclase / dehydrase and lipid transport. | 0.435 |
SFF98166.1 | SFF98117.1 | SAMN05421541_1389 | SAMN05421541_1387 | Pimeloyl-ACP methyl ester carboxylesterase. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.773 |
SFF98166.1 | SFF98157.1 | SAMN05421541_1389 | SAMN05421541_1388 | Pimeloyl-ACP methyl ester carboxylesterase. | Histidine kinase. | 0.773 |
SFF98166.1 | SFF98179.1 | SAMN05421541_1389 | SAMN05421541_13810 | Pimeloyl-ACP methyl ester carboxylesterase. | Putative drug exporter of the RND superfamily. | 0.580 |
SFF98166.1 | SFF98191.1 | SAMN05421541_1389 | SAMN05421541_13811 | Pimeloyl-ACP methyl ester carboxylesterase. | Polyketide cyclase / dehydrase and lipid transport. | 0.435 |
SFF98179.1 | SFF73181.1 | SAMN05421541_13810 | SAMN05421541_119159 | Putative drug exporter of the RND superfamily. | PAP2 superfamily protein. | 0.417 |
SFF98179.1 | SFF98117.1 | SAMN05421541_13810 | SAMN05421541_1387 | Putative drug exporter of the RND superfamily. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.513 |
SFF98179.1 | SFF98157.1 | SAMN05421541_13810 | SAMN05421541_1388 | Putative drug exporter of the RND superfamily. | Histidine kinase. | 0.513 |
SFF98179.1 | SFF98166.1 | SAMN05421541_13810 | SAMN05421541_1389 | Putative drug exporter of the RND superfamily. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.580 |
SFF98179.1 | SFF98191.1 | SAMN05421541_13810 | SAMN05421541_13811 | Putative drug exporter of the RND superfamily. | Polyketide cyclase / dehydrase and lipid transport. | 0.642 |
SFF98191.1 | SFF98117.1 | SAMN05421541_13811 | SAMN05421541_1387 | Polyketide cyclase / dehydrase and lipid transport. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.435 |
SFF98191.1 | SFF98157.1 | SAMN05421541_13811 | SAMN05421541_1388 | Polyketide cyclase / dehydrase and lipid transport. | Histidine kinase. | 0.435 |
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