STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF98368.1Sugar lactone lactonase YvrE. (322 aa)    
Predicted Functional Partners:
SFF98378.1
Glyoxylase, beta-lactamase superfamily II.
 
    0.793
SFF58998.1
Type VII secretion protein EccE.
  
     0.717
SFE89670.1
Regulatory protein, tetR family.
  
     0.676
SFF62058.1
HD domain-containing protein.
  
     0.664
SFE39519.1
AAA ATPase domain-containing protein.
  
     0.603
SFF28859.1
Concanavalin A-like lectin/glucanases superfamily protein.
  
     0.567
SFF48626.1
Hypothetical protein.
  
     0.562
SFG02271.1
Hypothetical protein.
 
     0.551
SFF98391.1
Para-nitrobenzyl esterase; Belongs to the type-B carboxylesterase/lipase family.
  
    0.548
SFF09748.1
Glycosyl hydrolases family 39.
  
  
  0.542
Your Current Organism:
Actinoplanes philippinensis
NCBI taxonomy Id: 35752
Other names: A. philippinensis, ATCC 12427, DSM 43019, IFO 13878, JCM 3001, NBRC 13878, NRRL 2506, VKM Ac-842
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.