STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF99177.1Hypothetical protein. (316 aa)    
Predicted Functional Partners:
SFF99157.1
Putative hydrolase.
       0.741
SFF41286.1
Hypothetical protein.
   
   0.702
SFF49748.1
Hypothetical protein.
   
   0.702
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.691
SFF99147.1
Uncharacterized conserved protein, DUF885 familyt.
       0.680
SFF98240.1
Protein of unknown function.
   
   0.674
SFF01884.1
PAS domain S-box-containing protein.
    
  0.664
SFF23645.1
PAS domain S-box-containing protein.
    
  0.664
SFF76796.1
GAF domain-containing protein.
    
  0.664
SFF10296.1
Hypothetical protein.
 
     0.647
Your Current Organism:
Actinoplanes philippinensis
NCBI taxonomy Id: 35752
Other names: A. philippinensis, ATCC 12427, DSM 43019, IFO 13878, JCM 3001, NBRC 13878, NRRL 2506, VKM Ac-842
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.